Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga7Q6DD96 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Gm10252-201ENSMUST00000209541 832 ntBASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga7Q6DD96 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Gm22697-201ENSMUST00000175194 63 ntBASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga7Q6DD96 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Gm6433-201ENSMUST00000118634 875 ntBASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga7Q6DD96 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga7Q6DD96 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga7Q6DD96 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga7Q6DD96 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga7Q6DD96 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga7Q6DD96 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms