Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.71■□□□□ 0.27
Scube3Q66PY1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Gm9172-201ENSMUST00000212092 954 ntBASIC16.71■□□□□ 0.27
Scube3Q66PY1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.71■□□□□ 0.27
Scube3Q66PY1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scube3Q66PY1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.71■□□□□ 0.26
Scube3Q66PY1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scube3Q66PY1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scube3Q66PY1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.7■□□□□ 0.26
Scube3Q66PY1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.7■□□□□ 0.26
Scube3Q66PY1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.7■□□□□ 0.26
Scube3Q66PY1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scube3Q66PY1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
Scube3Q66PY1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Gm25925-201ENSMUST00000158314 306 ntBASIC16.69■□□□□ 0.26
Scube3Q66PY1 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.69■□□□□ 0.26
Scube3Q66PY1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Scube3Q66PY1 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.68■□□□□ 0.26
Scube3Q66PY1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scube3Q66PY1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scube3Q66PY1 Gm4459-201ENSMUST00000118750 468 ntBASIC16.68■□□□□ 0.26
Scube3Q66PY1 Gm5864-201ENSMUST00000202263 970 ntBASIC16.68■□□□□ 0.26
Scube3Q66PY1 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.68■□□□□ 0.26
Scube3Q66PY1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scube3Q66PY1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scube3Q66PY1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scube3Q66PY1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scube3Q66PY1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms