Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col7a1Q63870 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col7a1Q63870 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col7a1Q63870 Gm12957-201ENSMUST00000117835 377 ntBASIC13.1□□□□□ -0.31
Col7a1Q63870 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.1□□□□□ -0.31
Col7a1Q63870 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.1□□□□□ -0.31
Col7a1Q63870 Gm38225-201ENSMUST00000194001 393 ntBASIC13.1□□□□□ -0.31
Col7a1Q63870 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.1□□□□□ -0.31
Col7a1Q63870 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col7a1Q63870 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col7a1Q63870 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col7a1Q63870 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.09□□□□□ -0.31
Col7a1Q63870 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.09□□□□□ -0.31
Col7a1Q63870 Gm2272-201ENSMUST00000194903 582 ntBASIC13.09□□□□□ -0.31
Col7a1Q63870 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.09□□□□□ -0.31
Col7a1Q63870 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Col7a1Q63870 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col7a1Q63870 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col7a1Q63870 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.09□□□□□ -0.31
Col7a1Q63870 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col7a1Q63870 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col7a1Q63870 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col7a1Q63870 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Col7a1Q63870 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.08□□□□□ -0.32
Col7a1Q63870 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.08□□□□□ -0.32
Col7a1Q63870 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.08□□□□□ -0.32
Col7a1Q63870 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.08□□□□□ -0.32
Col7a1Q63870 Gm10478-201ENSMUST00000084451 396 ntBASIC13.08□□□□□ -0.32
Col7a1Q63870 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.08□□□□□ -0.32
Col7a1Q63870 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.08□□□□□ -0.32
Col7a1Q63870 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.08□□□□□ -0.32
Col7a1Q63870 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Col7a1Q63870 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.08□□□□□ -0.32
Col7a1Q63870 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col7a1Q63870 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.08□□□□□ -0.32
Col7a1Q63870 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col7a1Q63870 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col7a1Q63870 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Gm13392-201ENSMUST00000117708 150 ntBASIC13.07□□□□□ -0.32
Col7a1Q63870 Gm12176-201ENSMUST00000121420 875 ntBASIC13.07□□□□□ -0.32
Col7a1Q63870 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Gm45841-201ENSMUST00000207700 164 ntBASIC13.07□□□□□ -0.32
Col7a1Q63870 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Col7a1Q63870 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.07□□□□□ -0.32
Col7a1Q63870 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col7a1Q63870 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.07□□□□□ -0.32
Col7a1Q63870 Gm38241-201ENSMUST00000192641 898 ntBASIC13.07□□□□□ -0.32
Col7a1Q63870 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Col7a1Q63870 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.07□□□□□ -0.32
Col7a1Q63870 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col7a1Q63870 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col7a1Q63870 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col7a1Q63870 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col7a1Q63870 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col7a1Q63870 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.06□□□□□ -0.32
Col7a1Q63870 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col7a1Q63870 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col7a1Q63870 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col7a1Q63870 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col7a1Q63870 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.06□□□□□ -0.32
Col7a1Q63870 Gm13226-201ENSMUST00000117838 404 ntBASIC13.06□□□□□ -0.32
Col7a1Q63870 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col7a1Q63870 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms