Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.59□□□□□ -0.55
Ndufa4Q62425 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa4Q62425 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndufa4Q62425 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Ndufa4Q62425 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Ndufa4Q62425 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Ndufa4Q62425 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.58□□□□□ -0.56
Ndufa4Q62425 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.58□□□□□ -0.56
Ndufa4Q62425 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Gm27275-201ENSMUST00000184318 272 ntBASIC11.58□□□□□ -0.56
Ndufa4Q62425 Gm36967-201ENSMUST00000193814 266 ntBASIC11.58□□□□□ -0.56
Ndufa4Q62425 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ndufa4Q62425 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Gm13186-201ENSMUST00000118031 316 ntBASIC11.57□□□□□ -0.56
Ndufa4Q62425 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ndufa4Q62425 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa4Q62425 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.56□□□□□ -0.56
Ndufa4Q62425 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.56□□□□□ -0.56
Ndufa4Q62425 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms