Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Six2Q62232 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Six2Q62232 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.97■□□□□ 0.31
Six2Q62232 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Six2Q62232 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Six2Q62232 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Six2Q62232 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.97■□□□□ 0.31
Six2Q62232 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.97■□□□□ 0.31
Six2Q62232 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.97■□□□□ 0.31
Six2Q62232 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.97■□□□□ 0.31
Six2Q62232 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.97■□□□□ 0.31
Six2Q62232 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Six2Q62232 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Six2Q62232 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.97■□□□□ 0.31
Six2Q62232 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six2Q62232 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Six2Q62232 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Six2Q62232 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.96■□□□□ 0.31
Six2Q62232 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.96■□□□□ 0.31
Six2Q62232 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Six2Q62232 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.96■□□□□ 0.31
Six2Q62232 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six2Q62232 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Six2Q62232 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Six2Q62232 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.95■□□□□ 0.3
Six2Q62232 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Six2Q62232 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Six2Q62232 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.95■□□□□ 0.3
Six2Q62232 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Six2Q62232 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.95■□□□□ 0.3
Six2Q62232 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Six2Q62232 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.95■□□□□ 0.3
Six2Q62232 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.95■□□□□ 0.3
Six2Q62232 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Six2Q62232 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.95■□□□□ 0.3
Six2Q62232 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six2Q62232 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Six2Q62232 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Asic1-205ENSMUST00000228185 1818 ntBASIC16.94■□□□□ 0.3
Six2Q62232 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Six2Q62232 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Six2Q62232 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Six2Q62232 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.94■□□□□ 0.3
Six2Q62232 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.94■□□□□ 0.3
Six2Q62232 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Six2Q62232 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six2Q62232 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms