Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.58■□□□□ 0.4
Ecm1Q61508 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ecm1Q61508 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ecm1Q61508 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ecm1Q61508 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ecm1Q61508 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ecm1Q61508 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ecm1Q61508 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ecm1Q61508 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ecm1Q61508 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.57■□□□□ 0.4
Ecm1Q61508 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Gm5177-201ENSMUST00000183092 997 ntBASIC17.57■□□□□ 0.4
Ecm1Q61508 Gm7063-201ENSMUST00000186840 981 ntBASIC17.57■□□□□ 0.4
Ecm1Q61508 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.57■□□□□ 0.4
Ecm1Q61508 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.57■□□□□ 0.4
Ecm1Q61508 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ecm1Q61508 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ecm1Q61508 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.56■□□□□ 0.4
Ecm1Q61508 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Ecm1Q61508 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.56■□□□□ 0.4
Ecm1Q61508 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.56■□□□□ 0.4
Ecm1Q61508 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ecm1Q61508 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ecm1Q61508 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ecm1Q61508 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ecm1Q61508 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ecm1Q61508 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ecm1Q61508 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.55■□□□□ 0.4
Ecm1Q61508 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ecm1Q61508 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Gm15427-201ENSMUST00000117288 531 ntBASIC17.55■□□□□ 0.4
Ecm1Q61508 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.55■□□□□ 0.4
Ecm1Q61508 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.55■□□□□ 0.4
Ecm1Q61508 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Gm45612-201ENSMUST00000211320 160 ntBASIC17.55■□□□□ 0.4
Ecm1Q61508 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.55■□□□□ 0.4
Ecm1Q61508 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ecm1Q61508 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ecm1Q61508 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.55■□□□□ 0.4
Ecm1Q61508 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.54■□□□□ 0.4
Ecm1Q61508 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Grk6-207ENSMUST00000225925 2769 ntBASIC17.54■□□□□ 0.4
Ecm1Q61508 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Ecm1Q61508 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.54■□□□□ 0.4
Ecm1Q61508 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Ecm1Q61508 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.54■□□□□ 0.4
Ecm1Q61508 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Gm27301-201ENSMUST00000184012 127 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms