Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sox17Q61473 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15□□□□□ -0.01
Sox17Q61473 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sox17Q61473 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Sox17Q61473 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15□□□□□ -0.01
Sox17Q61473 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15□□□□□ -0.01
Sox17Q61473 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15□□□□□ -0.01
Sox17Q61473 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sox17Q61473 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15□□□□□ -0.01
Sox17Q61473 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox17Q61473 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox17Q61473 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.99□□□□□ -0.01
Sox17Q61473 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox17Q61473 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.99□□□□□ -0.01
Sox17Q61473 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox17Q61473 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox17Q61473 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox17Q61473 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox17Q61473 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sox17Q61473 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sox17Q61473 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sox17Q61473 Gm12441-201ENSMUST00000121806 588 ntBASIC14.98□□□□□ -0.01
Sox17Q61473 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.98□□□□□ -0.01
Sox17Q61473 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.98□□□□□ -0.01
Sox17Q61473 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sox17Q61473 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sox17Q61473 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox17Q61473 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.97□□□□□ -0.01
Sox17Q61473 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sox17Q61473 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Sox17Q61473 Gm36967-201ENSMUST00000193814 266 ntBASIC14.97□□□□□ -0.01
Sox17Q61473 Gm44450-201ENSMUST00000199528 114 ntBASIC14.97□□□□□ -0.01
Sox17Q61473 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.97□□□□□ -0.01
Sox17Q61473 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox17Q61473 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox17Q61473 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sox17Q61473 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox17Q61473 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms