Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxd1Q61345 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxd1Q61345 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxd1Q61345 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxd1Q61345 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.34■□□□□ 0.53
Foxd1Q61345 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxd1Q61345 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxd1Q61345 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Foxd1Q61345 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Foxd1Q61345 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxd1Q61345 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Foxd1Q61345 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Foxd1Q61345 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxd1Q61345 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxd1Q61345 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxd1Q61345 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxd1Q61345 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxd1Q61345 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Foxd1Q61345 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Foxd1Q61345 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxd1Q61345 Gm25745-201ENSMUST00000174945 133 ntBASIC18.33■□□□□ 0.52
Foxd1Q61345 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxd1Q61345 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Foxd1Q61345 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxd1Q61345 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxd1Q61345 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.33■□□□□ 0.52
Foxd1Q61345 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Foxd1Q61345 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Foxd1Q61345 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxd1Q61345 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Foxd1Q61345 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Foxd1Q61345 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Foxd1Q61345 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.32■□□□□ 0.52
Foxd1Q61345 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxd1Q61345 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Foxd1Q61345 Gm27989-201ENSMUST00000184721 107 ntBASIC18.32■□□□□ 0.52
Foxd1Q61345 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.32■□□□□ 0.52
Foxd1Q61345 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxd1Q61345 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.32■□□□□ 0.52
Foxd1Q61345 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.32■□□□□ 0.52
Foxd1Q61345 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxd1Q61345 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxd1Q61345 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Foxd1Q61345 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Foxd1Q61345 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Foxd1Q61345 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.31■□□□□ 0.52
Foxd1Q61345 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.31■□□□□ 0.52
Foxd1Q61345 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.31■□□□□ 0.52
Foxd1Q61345 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.31■□□□□ 0.52
Foxd1Q61345 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Foxd1Q61345 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.31■□□□□ 0.52
Foxd1Q61345 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.31■□□□□ 0.52
Foxd1Q61345 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Foxd1Q61345 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.3■□□□□ 0.52
Foxd1Q61345 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.3■□□□□ 0.52
Foxd1Q61345 Gm7653-201ENSMUST00000214567 508 ntBASIC18.3■□□□□ 0.52
Foxd1Q61345 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.3■□□□□ 0.52
Foxd1Q61345 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Foxd1Q61345 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Foxd1Q61345 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxd1Q61345 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxd1Q61345 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Foxd1Q61345 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Foxd1Q61345 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.29■□□□□ 0.52
Foxd1Q61345 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Foxd1Q61345 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Foxd1Q61345 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.29■□□□□ 0.52
Foxd1Q61345 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.29■□□□□ 0.52
Foxd1Q61345 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Foxd1Q61345 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Foxd1Q61345 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Foxd1Q61345 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Foxd1Q61345 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms