Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col11a1Q61245 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col11a1Q61245 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col11a1Q61245 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Col11a1Q61245 Gm6973-201ENSMUST00000117080 721 ntBASIC17.71■□□□□ 0.43
Col11a1Q61245 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.71■□□□□ 0.43
Col11a1Q61245 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col11a1Q61245 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.71■□□□□ 0.43
Col11a1Q61245 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col11a1Q61245 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Col11a1Q61245 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col11a1Q61245 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col11a1Q61245 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col11a1Q61245 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.71■□□□□ 0.43
Col11a1Q61245 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col11a1Q61245 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col11a1Q61245 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col11a1Q61245 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col11a1Q61245 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Gm2810-201ENSMUST00000118681 990 ntBASIC17.7■□□□□ 0.42
Col11a1Q61245 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.7■□□□□ 0.42
Col11a1Q61245 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col11a1Q61245 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Col11a1Q61245 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Col11a1Q61245 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.7■□□□□ 0.42
Col11a1Q61245 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col11a1Q61245 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Col11a1Q61245 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col11a1Q61245 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a1Q61245 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col11a1Q61245 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a1Q61245 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a1Q61245 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a1Q61245 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a1Q61245 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.69■□□□□ 0.42
Col11a1Q61245 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.69■□□□□ 0.42
Col11a1Q61245 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col11a1Q61245 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a1Q61245 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a1Q61245 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col11a1Q61245 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a1Q61245 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col11a1Q61245 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 Gm6415-201ENSMUST00000118488 348 ntBASIC17.68■□□□□ 0.42
Col11a1Q61245 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Col11a1Q61245 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.68■□□□□ 0.42
Col11a1Q61245 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.68■□□□□ 0.42
Col11a1Q61245 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col11a1Q61245 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.68■□□□□ 0.42
Col11a1Q61245 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.68■□□□□ 0.42
Col11a1Q61245 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Col11a1Q61245 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col11a1Q61245 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col11a1Q61245 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms