Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf1Q5U4C3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf1Q5U4C3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf1Q5U4C3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Gm8318-201ENSMUST00000182954 872 ntBASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Gm45747-201ENSMUST00000212203 999 ntBASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf1Q5U4C3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf1Q5U4C3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms