Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Gm43575-201ENSMUST00000196420 516 ntBASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-2Q5R1I4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-2Q5R1I4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-2Q5R1I4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-2Q5R1I4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-2Q5R1I4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-2Q5R1I4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-2Q5R1I4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-2Q5R1I4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-2Q5R1I4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-2Q5R1I4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-2Q5R1I4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Gm5682-201ENSMUST00000173402 505 ntBASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Mir8117-201ENSMUST00000184773 107 ntBASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Gm37153-201ENSMUST00000193637 231 ntBASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-2Q5R1I4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.94□□□□□ -0.18
Trav6-2Q5R1I4 Gm14822-201ENSMUST00000122247 291 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms