Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarf1Q5ND28 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Gm5864-201ENSMUST00000202263 970 ntBASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Gm18622-201ENSMUST00000219361 595 ntBASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.42■□□□□ 0.38
Scarf1Q5ND28 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Scarf1Q5ND28 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarf1Q5ND28 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.41■□□□□ 0.38
Scarf1Q5ND28 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Gm13884-201ENSMUST00000118103 829 ntBASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Gm11452-201ENSMUST00000122376 690 ntBASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Gm8655-201ENSMUST00000221159 852 ntBASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scarf1Q5ND28 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.39■□□□□ 0.38
Scarf1Q5ND28 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Scarf1Q5ND28 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms