Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps41Q5KU39 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.66■□□□□ 0.26
Vps41Q5KU39 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Gm5417-201ENSMUST00000079706 384 ntBASIC16.66■□□□□ 0.26
Vps41Q5KU39 Gm10812-201ENSMUST00000099864 546 ntBASIC16.66■□□□□ 0.26
Vps41Q5KU39 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps41Q5KU39 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps41Q5KU39 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Vps41Q5KU39 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps41Q5KU39 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.63■□□□□ 0.25
Vps41Q5KU39 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps41Q5KU39 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms