Protein–RNA interactions for Protein: Q5H8B9

Frem3, FRAS1-related extracellular matrix protein 3, mousemouse

Predictions only

Length 2,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem3Q5H8B9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Frem3Q5H8B9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Gm17271-201ENSMUST00000165535 355 ntBASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Mir6990-201ENSMUST00000183724 91 ntBASIC16.03■□□□□ 0.16
Frem3Q5H8B9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Frem3Q5H8B9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Gm11745-201ENSMUST00000121669 448 ntBASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Gm43125-201ENSMUST00000201724 730 ntBASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Frem3Q5H8B9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Frem3Q5H8B9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 AA543401-201ENSMUST00000164248 1269 ntBASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.01■□□□□ 0.15
Frem3Q5H8B9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Frem3Q5H8B9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms