Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 AA414768-201ENSMUST00000121924 1257 ntBASIC15.79■□□□□ 0.12
Scn2bQ56A07 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.79■□□□□ 0.12
Scn2bQ56A07 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.79■□□□□ 0.12
Scn2bQ56A07 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.79■□□□□ 0.12
Scn2bQ56A07 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.79■□□□□ 0.12
Scn2bQ56A07 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2bQ56A07 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.78■□□□□ 0.12
Scn2bQ56A07 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.78■□□□□ 0.12
Scn2bQ56A07 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn2bQ56A07 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.77■□□□□ 0.12
Scn2bQ56A07 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Gm25016-201ENSMUST00000158399 131 ntBASIC15.77■□□□□ 0.12
Scn2bQ56A07 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn2bQ56A07 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn2bQ56A07 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn2bQ56A07 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scn2bQ56A07 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Scn2bQ56A07 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn2bQ56A07 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scn2bQ56A07 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.76■□□□□ 0.11
Scn2bQ56A07 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn2bQ56A07 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms