Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Gm5682-201ENSMUST00000173402 505 ntBASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rc3h1Q4VGL6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rc3h1Q4VGL6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Gm7222-201ENSMUST00000117512 906 ntBASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Gm6257-201ENSMUST00000163864 910 ntBASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Psmb5-202ENSMUST00000227257 622 ntBASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h1Q4VGL6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h1Q4VGL6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms