Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Haglr-201ENSMUST00000100000 2085 ntBASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shank3Q4ACU6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Gm12151-201ENSMUST00000121374 290 ntBASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.68■□□□□ 0.74
Shank3Q4ACU6 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shank3Q4ACU6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Gm2423-201ENSMUST00000074863 733 ntBASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shank3Q4ACU6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Gm15693-201ENSMUST00000120470 637 ntBASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shank3Q4ACU6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Gm5866-201ENSMUST00000177881 973 ntBASIC19.65■□□□□ 0.74
Shank3Q4ACU6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms