Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Gm8097-201ENSMUST00000117903 829 ntBASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp48Q3V0C5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp48Q3V0C5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Usp48Q3V0C5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms