Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Gm18421-201ENSMUST00000204122 625 ntBASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm29609Q3UU56 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Gm11336-201ENSMUST00000118168 334 ntBASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm29609Q3UU56 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm29609Q3UU56 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm29609Q3UU56 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm29609Q3UU56 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Psmb5-202ENSMUST00000227257 622 ntBASIC16.7■□□□□ 0.26
Gm29609Q3UU56 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm29609Q3UU56 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Gm14494-201ENSMUST00000118786 435 ntBASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Gm29609Q3UU56 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm29609Q3UU56 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.68■□□□□ 0.26
Gm29609Q3UU56 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm29609Q3UU56 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm29609Q3UU56 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Gm29609Q3UU56 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms