Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Gm4459-201ENSMUST00000118750 468 ntBASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsmem1Q3UQS2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Gm27459-201ENSMUST00000184860 107 ntBASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsmem1Q3UQS2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsmem1Q3UQS2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Gm24589-201ENSMUST00000116692 94 ntBASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsmem1Q3UQS2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsmem1Q3UQS2 Gm8655-201ENSMUST00000221159 852 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms