Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Gm6433-201ENSMUST00000118634 875 ntBASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Gm18958-201ENSMUST00000174258 762 ntBASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Gm7791-201ENSMUST00000219066 539 ntBASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Gm9987-201ENSMUST00000069768 567 ntBASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa3Q3UPR0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Shisa3Q3UPR0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Shisa3Q3UPR0 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.77□□□□□ -0.2
Shisa3Q3UPR0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Shisa3Q3UPR0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Shisa3Q3UPR0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Shisa3Q3UPR0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Shisa3Q3UPR0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Il3ra-202ENSMUST00000223589 738 ntBASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa3Q3UPR0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa3Q3UPR0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa3Q3UPR0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa3Q3UPR0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa3Q3UPR0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa3Q3UPR0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa3Q3UPR0 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.76□□□□□ -0.21
Shisa3Q3UPR0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa3Q3UPR0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa3Q3UPR0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms