Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nlrc4Q3UP24 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nlrc4Q3UP24 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nlrc4Q3UP24 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Nlrc4Q3UP24 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nlrc4Q3UP24 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Gm4459-201ENSMUST00000118750 468 ntBASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nlrc4Q3UP24 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm27741-201ENSMUST00000185060 237 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44357-201ENSMUST00000195897 142 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm19658-201ENSMUST00000196231 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44367-201ENSMUST00000196836 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44350-201ENSMUST00000197197 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44390-201ENSMUST00000197533 144 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44313-201ENSMUST00000198018 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44486-201ENSMUST00000198508 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44314-201ENSMUST00000199263 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44394-201ENSMUST00000199558 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44484-201ENSMUST00000199873 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44466-201ENSMUST00000200264 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Gm44359-201ENSMUST00000200671 138 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nlrc4Q3UP24 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Gm12497-201ENSMUST00000138778 237 ntBASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nlrc4Q3UP24 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms