Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Mir5126-201ENSMUST00000175513 77 ntBASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Gm6089-201ENSMUST00000197666 938 ntBASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Gm15173-201ENSMUST00000122049 433 ntBASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Naf1Q3UMQ8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Naf1Q3UMQ8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Naf1Q3UMQ8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Naf1Q3UMQ8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Gm1401-201ENSMUST00000122048 772 ntBASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Gm18206-201ENSMUST00000207027 926 ntBASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms