Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 AA414768-201ENSMUST00000121924 1257 ntBASIC15.03■□□□□ -0
Brf2Q3UAW9 Gm6345-202ENSMUST00000180900 204 ntBASIC15.03■□□□□ -0
Brf2Q3UAW9 Gm17808-201ENSMUST00000200859 894 ntBASIC15.03■□□□□ -0
Brf2Q3UAW9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.03■□□□□ -0
Brf2Q3UAW9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Brf2Q3UAW9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.03■□□□□ -0
Brf2Q3UAW9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Brf2Q3UAW9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.03■□□□□ -0
Brf2Q3UAW9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.02■□□□□ -0
Brf2Q3UAW9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.02■□□□□ -0
Brf2Q3UAW9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.02■□□□□ -0
Brf2Q3UAW9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Gm45328-201ENSMUST00000210942 917 ntBASIC15.02■□□□□ -0
Brf2Q3UAW9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Brf2Q3UAW9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.02■□□□□ -0
Brf2Q3UAW9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Brf2Q3UAW9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Brf2Q3UAW9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Gm6659-201ENSMUST00000174752 547 ntBASIC15□□□□□ -0.01
Brf2Q3UAW9 Gm29518-201ENSMUST00000190858 372 ntBASIC15□□□□□ -0.01
Brf2Q3UAW9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15□□□□□ -0.01
Brf2Q3UAW9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15□□□□□ -0.01
Brf2Q3UAW9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Gm42473-201ENSMUST00000201056 2291 ntBASIC15□□□□□ -0.01
Brf2Q3UAW9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15□□□□□ -0.01
Brf2Q3UAW9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms