Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Col5a2Q3U962 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col5a2Q3U962 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.8■□□□□ 0.6
Col5a2Q3U962 Gm9385-201ENSMUST00000117563 472 ntBASIC18.8■□□□□ 0.6
Col5a2Q3U962 Gm12008-201ENSMUST00000117791 755 ntBASIC18.8■□□□□ 0.6
Col5a2Q3U962 Gm6257-201ENSMUST00000163864 910 ntBASIC18.8■□□□□ 0.6
Col5a2Q3U962 Gm5866-201ENSMUST00000177881 973 ntBASIC18.8■□□□□ 0.6
Col5a2Q3U962 Gm27306-201ENSMUST00000183970 107 ntBASIC18.8■□□□□ 0.6
Col5a2Q3U962 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.8■□□□□ 0.6
Col5a2Q3U962 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col5a2Q3U962 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col5a2Q3U962 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.8■□□□□ 0.6
Col5a2Q3U962 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col5a2Q3U962 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col5a2Q3U962 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col5a2Q3U962 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col5a2Q3U962 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col5a2Q3U962 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col5a2Q3U962 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.79■□□□□ 0.6
Col5a2Q3U962 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col5a2Q3U962 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Gm18057-201ENSMUST00000208220 503 ntBASIC18.78■□□□□ 0.6
Col5a2Q3U962 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.78■□□□□ 0.6
Col5a2Q3U962 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col5a2Q3U962 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Col5a2Q3U962 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.77■□□□□ 0.59
Col5a2Q3U962 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.77■□□□□ 0.59
Col5a2Q3U962 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Col5a2Q3U962 Gm43767-201ENSMUST00000198933 381 ntBASIC18.77■□□□□ 0.59
Col5a2Q3U962 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Col5a2Q3U962 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col5a2Q3U962 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col5a2Q3U962 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Col5a2Q3U962 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.76■□□□□ 0.59
Col5a2Q3U962 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.76■□□□□ 0.59
Col5a2Q3U962 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col5a2Q3U962 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col5a2Q3U962 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Col5a2Q3U962 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms