Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf149Q3U2C5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Il3ra-202ENSMUST00000223589 738 ntBASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf149Q3U2C5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf149Q3U2C5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf149Q3U2C5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf149Q3U2C5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf149Q3U2C5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf149Q3U2C5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rnf149Q3U2C5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rnf149Q3U2C5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
Rnf149Q3U2C5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf149Q3U2C5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf149Q3U2C5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Mir5130-201ENSMUST00000175160 84 ntBASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf149Q3U2C5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms