Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.81□□□□□ -0.2
Q3U1D9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.81□□□□□ -0.2
Q3U1D9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.81□□□□□ -0.2
Q3U1D9 Gm18622-201ENSMUST00000219361 595 ntBASIC13.81□□□□□ -0.2
Q3U1D9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.81□□□□□ -0.2
Q3U1D9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Q3U1D9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Q3U1D9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q3U1D9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.8□□□□□ -0.2
Q3U1D9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.8□□□□□ -0.2
Q3U1D9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Q3U1D9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.8□□□□□ -0.2
Q3U1D9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.8□□□□□ -0.2
Q3U1D9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Q3U1D9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Q3U1D9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Q3U1D9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Q3U1D9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3U1D9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Q3U1D9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.79□□□□□ -0.2
Q3U1D9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Q3U1D9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.79□□□□□ -0.2
Q3U1D9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.79□□□□□ -0.2
Q3U1D9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.79□□□□□ -0.2
Q3U1D9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.79□□□□□ -0.2
Q3U1D9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Q3U1D9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Q3U1D9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Q3U1D9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Q3U1D9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.78□□□□□ -0.2
Q3U1D9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.78□□□□□ -0.2
Q3U1D9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3U1D9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms