Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Gm29707-201ENSMUST00000196325 491 ntBASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Trim43aQ3TL54 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Gm7370-201ENSMUST00000219471 767 ntBASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43aQ3TL54 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Gm13436-201ENSMUST00000120418 567 ntBASIC16.91■□□□□ 0.3
Trim43aQ3TL54 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43aQ3TL54 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms