Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim7Q3TJD7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim7Q3TJD7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim7Q3TJD7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.8■□□□□ 0.44
Pdlim7Q3TJD7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim7Q3TJD7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pdlim7Q3TJD7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.8■□□□□ 0.44
Pdlim7Q3TJD7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Gm18489-201ENSMUST00000172565 551 ntBASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim7Q3TJD7 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Haglr-201ENSMUST00000100000 2085 ntBASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim7Q3TJD7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Gm27301-201ENSMUST00000184012 127 ntBASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim7Q3TJD7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdlim7Q3TJD7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdlim7Q3TJD7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdlim7Q3TJD7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pdlim7Q3TJD7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pdlim7Q3TJD7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdlim7Q3TJD7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Mir6990-201ENSMUST00000183724 91 ntBASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Gm43474-201ENSMUST00000196415 774 ntBASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim7Q3TJD7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pdlim7Q3TJD7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pdlim7Q3TJD7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms