Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cul4aQ3TCH7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Gm22697-201ENSMUST00000175194 63 ntBASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cul4aQ3TCH7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Gm18032-201ENSMUST00000222541 538 ntBASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cul4aQ3TCH7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Gm15565-201ENSMUST00000118890 427 ntBASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms