Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Gm25948-201ENSMUST00000175334 112 ntBASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Gm19164-201ENSMUST00000210667 640 ntBASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chrna5Q2MKA5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Gm27301-201ENSMUST00000184012 127 ntBASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Gm43474-201ENSMUST00000196415 774 ntBASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna5Q2MKA5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chrna5Q2MKA5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna5Q2MKA5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Mir6990-201ENSMUST00000183724 91 ntBASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms