Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Gm4984-201ENSMUST00000115987 360 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Gm7775-201ENSMUST00000218871 853 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Gm14042-201ENSMUST00000120139 833 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Gm13461-201ENSMUST00000120980 662 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.19□□□□□ -0.14
Chd8Q09XV5 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.19□□□□□ -0.14
Chd8Q09XV5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd8Q09XV5 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chd8Q09XV5 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.18□□□□□ -0.14
Chd8Q09XV5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.18□□□□□ -0.14
Chd8Q09XV5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Gm6973-201ENSMUST00000117080 721 ntBASIC14.18□□□□□ -0.14
Chd8Q09XV5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Gm17420-201ENSMUST00000164753 153 ntBASIC14.18□□□□□ -0.14
Chd8Q09XV5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Chd8Q09XV5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.18□□□□□ -0.14
Chd8Q09XV5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chd8Q09XV5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm4518-201ENSMUST00000182638 718 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm18056-201ENSMUST00000207670 568 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm18061-201ENSMUST00000208350 562 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm18063-201ENSMUST00000208529 568 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm18052-201ENSMUST00000208750 559 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms