Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nkx3-2P97503 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.03■□□□□ -0
Nkx3-2P97503 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx3-2P97503 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx3-2P97503 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx3-2P97503 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx3-2P97503 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx3-2P97503 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx3-2P97503 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.03■□□□□ -0
Nkx3-2P97503 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx3-2P97503 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx3-2P97503 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx3-2P97503 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx3-2P97503 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx3-2P97503 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx3-2P97503 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx3-2P97503 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx3-2P97503 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx3-2P97503 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx3-2P97503 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Nkx3-2P97503 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Nkx3-2P97503 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nkx3-2P97503 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx3-2P97503 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx3-2P97503 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.02■□□□□ -0
Nkx3-2P97503 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Nkx3-2P97503 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.02■□□□□ -0
Nkx3-2P97503 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.02■□□□□ -0
Nkx3-2P97503 Gm27867-201ENSMUST00000184778 125 ntBASIC15.02■□□□□ -0
Nkx3-2P97503 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Nkx3-2P97503 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx3-2P97503 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx3-2P97503 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.02□□□□□ -0.01
Nkx3-2P97503 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx3-2P97503 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx3-2P97503 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.01□□□□□ -0.01
Nkx3-2P97503 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.01□□□□□ -0.01
Nkx3-2P97503 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx3-2P97503 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nkx3-2P97503 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Nkx3-2P97503 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Nkx3-2P97503 Gm9449-201ENSMUST00000207265 1011 ntBASIC15□□□□□ -0.01
Nkx3-2P97503 AC160338.1-201ENSMUST00000214232 705 ntBASIC15□□□□□ -0.01
Nkx3-2P97503 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nkx3-2P97503 Gm36858-201ENSMUST00000194501 2391 ntBASIC15□□□□□ -0.01
Nkx3-2P97503 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15□□□□□ -0.01
Nkx3-2P97503 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms