Protein–RNA interactions for Protein: P97358

Taf1b, TATA box-binding protein-associated factor RNA polymerase I subunit B, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1bP97358 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Taf1bP97358 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Taf1bP97358 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Taf1bP97358 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Taf1bP97358 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Taf1bP97358 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Taf1bP97358 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Taf1bP97358 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.66■□□□□ 0.42
Taf1bP97358 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Taf1bP97358 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Taf1bP97358 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Taf1bP97358 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Taf1bP97358 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Taf1bP97358 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Taf1bP97358 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.65■□□□□ 0.42
Taf1bP97358 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.65■□□□□ 0.42
Taf1bP97358 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Taf1bP97358 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Taf1bP97358 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Taf1bP97358 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Taf1bP97358 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Taf1bP97358 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Taf1bP97358 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Taf1bP97358 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.64■□□□□ 0.41
Taf1bP97358 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.64■□□□□ 0.41
Taf1bP97358 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.64■□□□□ 0.41
Taf1bP97358 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Gm5264-201ENSMUST00000190584 848 ntBASIC17.64■□□□□ 0.41
Taf1bP97358 Gm37935-201ENSMUST00000192012 982 ntBASIC17.64■□□□□ 0.41
Taf1bP97358 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.64■□□□□ 0.41
Taf1bP97358 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.64■□□□□ 0.41
Taf1bP97358 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Taf1bP97358 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.63■□□□□ 0.41
Taf1bP97358 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.63■□□□□ 0.41
Taf1bP97358 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Taf1bP97358 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Taf1bP97358 Gm11764-201ENSMUST00000120221 623 ntBASIC17.63■□□□□ 0.41
Taf1bP97358 Gm15467-201ENSMUST00000120582 445 ntBASIC17.63■□□□□ 0.41
Taf1bP97358 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.63■□□□□ 0.41
Taf1bP97358 Gm6257-201ENSMUST00000163864 910 ntBASIC17.63■□□□□ 0.41
Taf1bP97358 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.63■□□□□ 0.41
Taf1bP97358 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Taf1bP97358 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.63■□□□□ 0.41
Taf1bP97358 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.63■□□□□ 0.41
Taf1bP97358 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Taf1bP97358 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms