Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh6P97326 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh6P97326 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Cdh6P97326 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh6P97326 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.15■□□□□ 0.18
Cdh6P97326 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cdh6P97326 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh6P97326 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh6P97326 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh6P97326 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh6P97326 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh6P97326 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cdh6P97326 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.14■□□□□ 0.17
Cdh6P97326 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.14■□□□□ 0.17
Cdh6P97326 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Gm9103-201ENSMUST00000119371 405 ntBASIC16.14■□□□□ 0.17
Cdh6P97326 Gm6257-201ENSMUST00000163864 910 ntBASIC16.14■□□□□ 0.17
Cdh6P97326 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdh6P97326 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh6P97326 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.13■□□□□ 0.17
Cdh6P97326 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
Cdh6P97326 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdh6P97326 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.13■□□□□ 0.17
Cdh6P97326 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdh6P97326 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.13■□□□□ 0.17
Cdh6P97326 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Gm9172-201ENSMUST00000212092 954 ntBASIC16.13■□□□□ 0.17
Cdh6P97326 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Cdh6P97326 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdh6P97326 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdh6P97326 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh6P97326 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cdh6P97326 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.12■□□□□ 0.17
Cdh6P97326 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cdh6P97326 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdh6P97326 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.12■□□□□ 0.17
Cdh6P97326 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Cdh6P97326 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.12■□□□□ 0.17
Cdh6P97326 Gm28033-201ENSMUST00000184224 96 ntBASIC16.12■□□□□ 0.17
Cdh6P97326 Gm27867-201ENSMUST00000184778 125 ntBASIC16.12■□□□□ 0.17
Cdh6P97326 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cdh6P97326 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh6P97326 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdh6P97326 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms