Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm9824-201ENSMUST00000178707 561 ntBASIC10.81□□□□□ -0.68
PrkdcP97313 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.81□□□□□ -0.68
PrkdcP97313 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
PrkdcP97313 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
PrkdcP97313 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.81□□□□□ -0.68
PrkdcP97313 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.81□□□□□ -0.68
PrkdcP97313 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.81□□□□□ -0.68
PrkdcP97313 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.81□□□□□ -0.68
PrkdcP97313 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PrkdcP97313 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC10.8□□□□□ -0.68
PrkdcP97313 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
PrkdcP97313 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.8□□□□□ -0.68
PrkdcP97313 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.8□□□□□ -0.68
PrkdcP97313 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
PrkdcP97313 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.8□□□□□ -0.68
PrkdcP97313 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
PrkdcP97313 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
PrkdcP97313 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
PrkdcP97313 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
PrkdcP97313 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
PrkdcP97313 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.8□□□□□ -0.68
PrkdcP97313 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.8□□□□□ -0.68
PrkdcP97313 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.8□□□□□ -0.68
PrkdcP97313 Gm29667-201ENSMUST00000190817 490 ntBASIC10.8□□□□□ -0.68
PrkdcP97313 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PrkdcP97313 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.8□□□□□ -0.68
PrkdcP97313 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.79□□□□□ -0.68
PrkdcP97313 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.79□□□□□ -0.68
PrkdcP97313 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
PrkdcP97313 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.79□□□□□ -0.68
PrkdcP97313 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC10.79□□□□□ -0.68
PrkdcP97313 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC10.79□□□□□ -0.68
PrkdcP97313 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Gm14767-201ENSMUST00000121559 586 ntBASIC10.79□□□□□ -0.68
PrkdcP97313 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
PrkdcP97313 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.79□□□□□ -0.68
PrkdcP97313 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC10.79□□□□□ -0.68
PrkdcP97313 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PrkdcP97313 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.78□□□□□ -0.68
PrkdcP97313 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.78□□□□□ -0.68
PrkdcP97313 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Gm36858-201ENSMUST00000194501 2391 ntBASIC10.78□□□□□ -0.68
PrkdcP97313 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
PrkdcP97313 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.78□□□□□ -0.68
PrkdcP97313 AY702102-202ENSMUST00000194651 1173 ntBASIC10.78□□□□□ -0.68
PrkdcP97313 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.78□□□□□ -0.68
PrkdcP97313 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms