Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Six5P70178 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.92□□□□□ -0.02
Six5P70178 Gm44454-201ENSMUST00000198541 138 ntBASIC14.92□□□□□ -0.02
Six5P70178 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.92□□□□□ -0.02
Six5P70178 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.92□□□□□ -0.02
Six5P70178 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Six5P70178 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Six5P70178 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.92□□□□□ -0.02
Six5P70178 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Six5P70178 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.91□□□□□ -0.02
Six5P70178 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Six5P70178 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Six5P70178 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.91□□□□□ -0.02
Six5P70178 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Six5P70178 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Six5P70178 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Six5P70178 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Six5P70178 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.91□□□□□ -0.02
Six5P70178 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Six5P70178 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.91□□□□□ -0.02
Six5P70178 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six5P70178 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Six5P70178 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.9□□□□□ -0.02
Six5P70178 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Six5P70178 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.9□□□□□ -0.02
Six5P70178 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Six5P70178 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.9□□□□□ -0.02
Six5P70178 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.9□□□□□ -0.02
Six5P70178 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.9□□□□□ -0.02
Six5P70178 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Six5P70178 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Six5P70178 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Six5P70178 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Six5P70178 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Six5P70178 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Six5P70178 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Six5P70178 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Six5P70178 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.89□□□□□ -0.03
Six5P70178 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Six5P70178 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Six5P70178 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Six5P70178 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms