Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a1P61620 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a1P61620 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.06□□□□□ -0.16
Sec61a1P61620 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.06□□□□□ -0.16
Sec61a1P61620 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a1P61620 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.06□□□□□ -0.16
Sec61a1P61620 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.05□□□□□ -0.16
Sec61a1P61620 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Gm18958-201ENSMUST00000174258 762 ntBASIC14.05□□□□□ -0.16
Sec61a1P61620 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sec61a1P61620 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Sec61a1P61620 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sec61a1P61620 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Sec61a1P61620 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a1P61620 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.04□□□□□ -0.16
Sec61a1P61620 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.04□□□□□ -0.16
Sec61a1P61620 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Sec61a1P61620 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.04□□□□□ -0.16
Sec61a1P61620 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 AA414768-201ENSMUST00000121924 1257 ntBASIC14.04□□□□□ -0.16
Sec61a1P61620 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.04□□□□□ -0.16
Sec61a1P61620 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms