Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.17□□□□□ -0.14
Sf3b6P59708 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b6P59708 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b6P59708 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.16□□□□□ -0.14
Sf3b6P59708 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b6P59708 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Gm21814-202ENSMUST00000203277 873 ntBASIC14.16□□□□□ -0.14
Sf3b6P59708 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b6P59708 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b6P59708 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b6P59708 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sf3b6P59708 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b6P59708 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sf3b6P59708 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b6P59708 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.15□□□□□ -0.14
Sf3b6P59708 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.15□□□□□ -0.14
Sf3b6P59708 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sf3b6P59708 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.15□□□□□ -0.14
Sf3b6P59708 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b6P59708 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sf3b6P59708 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b6P59708 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Sf3b6P59708 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b6P59708 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.14□□□□□ -0.15
Sf3b6P59708 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b6P59708 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.14□□□□□ -0.15
Sf3b6P59708 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sf3b6P59708 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b6P59708 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms