Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdkn2bP55271 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Mir5130-201ENSMUST00000175160 84 ntBASIC15.28■□□□□ 0.04
Cdkn2bP55271 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cdkn2bP55271 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn2bP55271 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkn2bP55271 BC037039-201ENSMUST00000192003 2205 ntBASIC15.27■□□□□ 0.04
Cdkn2bP55271 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.27■□□□□ 0.04
Cdkn2bP55271 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdkn2bP55271 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.27■□□□□ 0.04
Cdkn2bP55271 Gm45058-201ENSMUST00000205810 766 ntBASIC15.27■□□□□ 0.04
Cdkn2bP55271 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkn2bP55271 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn2bP55271 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Gm37722-201ENSMUST00000193757 208 ntBASIC15.26■□□□□ 0.03
Cdkn2bP55271 Gm44430-201ENSMUST00000203376 995 ntBASIC15.26■□□□□ 0.03
Cdkn2bP55271 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.26■□□□□ 0.03
Cdkn2bP55271 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn2bP55271 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.25■□□□□ 0.03
Cdkn2bP55271 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms