Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.72■□□□□ 0.27
NcanP55066 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NcanP55066 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Gm27306-201ENSMUST00000183970 107 ntBASIC16.72■□□□□ 0.27
NcanP55066 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.72■□□□□ 0.27
NcanP55066 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.72■□□□□ 0.27
NcanP55066 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.72■□□□□ 0.27
NcanP55066 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.72■□□□□ 0.27
NcanP55066 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NcanP55066 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NcanP55066 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NcanP55066 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NcanP55066 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NcanP55066 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NcanP55066 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
NcanP55066 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.71■□□□□ 0.27
NcanP55066 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.71■□□□□ 0.27
NcanP55066 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.71■□□□□ 0.27
NcanP55066 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.71■□□□□ 0.27
NcanP55066 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.71■□□□□ 0.27
NcanP55066 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.71■□□□□ 0.27
NcanP55066 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.71■□□□□ 0.27
NcanP55066 Gm19164-201ENSMUST00000210667 640 ntBASIC16.71■□□□□ 0.27
NcanP55066 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.71■□□□□ 0.27
NcanP55066 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.71■□□□□ 0.27
NcanP55066 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NcanP55066 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NcanP55066 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NcanP55066 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.7■□□□□ 0.26
NcanP55066 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NcanP55066 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.7■□□□□ 0.26
NcanP55066 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
NcanP55066 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.7■□□□□ 0.26
NcanP55066 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NcanP55066 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.69■□□□□ 0.26
NcanP55066 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.69■□□□□ 0.26
NcanP55066 Gm17837-201ENSMUST00000186435 985 ntBASIC16.69■□□□□ 0.26
NcanP55066 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.69■□□□□ 0.26
NcanP55066 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.69■□□□□ 0.26
NcanP55066 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NcanP55066 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NcanP55066 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NcanP55066 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NcanP55066 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.69■□□□□ 0.26
NcanP55066 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms