Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Thap2-203ENSMUST00000218989 527 ntBASIC16.25■□□□□ 0.19
Sox1P53783 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sox1P53783 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sox1P53783 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sox1P53783 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.25■□□□□ 0.19
Sox1P53783 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.25■□□□□ 0.19
Sox1P53783 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox1P53783 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox1P53783 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sox1P53783 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox1P53783 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Sox1P53783 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox1P53783 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.24■□□□□ 0.19
Sox1P53783 Gm14928-201ENSMUST00000120198 477 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox1P53783 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Mir1938-201ENSMUST00000158746 100 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm4518-201ENSMUST00000182638 718 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm44855-201ENSMUST00000205725 362 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox1P53783 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sox1P53783 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox1P53783 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Sox1P53783 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox1P53783 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox1P53783 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox1P53783 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.24■□□□□ 0.19
Sox1P53783 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sox1P53783 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Sox1P53783 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.23■□□□□ 0.19
Sox1P53783 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.23■□□□□ 0.19
Sox1P53783 Mir7684-201ENSMUST00000183858 60 ntBASIC16.23■□□□□ 0.19
Sox1P53783 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox1P53783 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.23■□□□□ 0.19
Sox1P53783 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.22■□□□□ 0.19
Sox1P53783 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sox1P53783 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.22■□□□□ 0.19
Sox1P53783 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Gm16215-201ENSMUST00000161990 637 ntBASIC16.22■□□□□ 0.19
Sox1P53783 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Sox1P53783 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.22■□□□□ 0.19
Sox1P53783 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Gm44719-201ENSMUST00000206404 149 ntBASIC16.22■□□□□ 0.19
Sox1P53783 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.22■□□□□ 0.19
Sox1P53783 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.22■□□□□ 0.19
Sox1P53783 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sox1P53783 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.22■□□□□ 0.19
Sox1P53783 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox1P53783 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms