Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.77■□□□□ 0.12
Pdx1P52946 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Pdx1P52946 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdx1P52946 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdx1P52946 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.77■□□□□ 0.11
Pdx1P52946 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdx1P52946 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdx1P52946 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.76■□□□□ 0.11
Pdx1P52946 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Pdx1P52946 Gm15165-201ENSMUST00000118140 502 ntBASIC15.76■□□□□ 0.11
Pdx1P52946 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.76■□□□□ 0.11
Pdx1P52946 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.76■□□□□ 0.11
Pdx1P52946 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.76■□□□□ 0.11
Pdx1P52946 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdx1P52946 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pdx1P52946 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.76■□□□□ 0.11
Pdx1P52946 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pdx1P52946 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.75■□□□□ 0.11
Pdx1P52946 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.75■□□□□ 0.11
Pdx1P52946 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdx1P52946 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.74■□□□□ 0.11
Pdx1P52946 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.74■□□□□ 0.11
Pdx1P52946 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pdx1P52946 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.74■□□□□ 0.11
Pdx1P52946 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Pdx1P52946 Gm15372-201ENSMUST00000120729 834 ntBASIC15.74■□□□□ 0.11
Pdx1P52946 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.74■□□□□ 0.11
Pdx1P52946 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Pdx1P52946 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.74■□□□□ 0.11
Pdx1P52946 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.74■□□□□ 0.11
Pdx1P52946 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pdx1P52946 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Pdx1P52946 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Pdx1P52946 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pdx1P52946 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.74■□□□□ 0.11
Pdx1P52946 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdx1P52946 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.74■□□□□ 0.11
Pdx1P52946 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pdx1P52946 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.73■□□□□ 0.11
Pdx1P52946 Gm25406-201ENSMUST00000157599 105 ntBASIC15.73■□□□□ 0.11
Pdx1P52946 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms