Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GdnfP48540 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GdnfP48540 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.98□□□□□ -0.17
GdnfP48540 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GdnfP48540 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GdnfP48540 Gm2274-201ENSMUST00000184539 609 ntBASIC13.98□□□□□ -0.17
GdnfP48540 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GdnfP48540 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.98□□□□□ -0.17
GdnfP48540 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.98□□□□□ -0.17
GdnfP48540 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GdnfP48540 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GdnfP48540 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GdnfP48540 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GdnfP48540 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GdnfP48540 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.98□□□□□ -0.17
GdnfP48540 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.98□□□□□ -0.17
GdnfP48540 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GdnfP48540 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GdnfP48540 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GdnfP48540 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GdnfP48540 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GdnfP48540 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GdnfP48540 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.97□□□□□ -0.17
GdnfP48540 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.97□□□□□ -0.17
GdnfP48540 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 App-207ENSMUST00000227737 2827 ntBASIC13.97□□□□□ -0.17
GdnfP48540 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.97□□□□□ -0.17
GdnfP48540 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GdnfP48540 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GdnfP48540 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
GdnfP48540 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GdnfP48540 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
GdnfP48540 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
GdnfP48540 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.96□□□□□ -0.17
GdnfP48540 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.96□□□□□ -0.17
GdnfP48540 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
GdnfP48540 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.96□□□□□ -0.17
GdnfP48540 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
GdnfP48540 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.96□□□□□ -0.17
GdnfP48540 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GdnfP48540 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
GdnfP48540 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
GdnfP48540 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
GdnfP48540 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
GdnfP48540 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GdnfP48540 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GdnfP48540 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GdnfP48540 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
GdnfP48540 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
GdnfP48540 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GdnfP48540 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GdnfP48540 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
GdnfP48540 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GdnfP48540 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GdnfP48540 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
GdnfP48540 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.95□□□□□ -0.18
GdnfP48540 Gm6433-201ENSMUST00000118634 875 ntBASIC13.95□□□□□ -0.18
GdnfP48540 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.95□□□□□ -0.18
GdnfP48540 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.95□□□□□ -0.18
GdnfP48540 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GdnfP48540 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GdnfP48540 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
GdnfP48540 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GdnfP48540 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GdnfP48540 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GdnfP48540 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GdnfP48540 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GdnfP48540 Sybu-209ENSMUST00000228639 4113 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms