Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.68■□□□□ 0.26
Rfx2P48379 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Gm6376-201ENSMUST00000209407 580 ntBASIC16.68■□□□□ 0.26
Rfx2P48379 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rfx2P48379 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx2P48379 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rfx2P48379 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rfx2P48379 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rfx2P48379 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rfx2P48379 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.67■□□□□ 0.26
Rfx2P48379 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.67■□□□□ 0.26
Rfx2P48379 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfx2P48379 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx2P48379 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx2P48379 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx2P48379 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rfx2P48379 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx2P48379 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx2P48379 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.66■□□□□ 0.26
Rfx2P48379 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfx2P48379 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rfx2P48379 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.66■□□□□ 0.26
Rfx2P48379 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx2P48379 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfx2P48379 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.66■□□□□ 0.26
Rfx2P48379 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx2P48379 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Rfx2P48379 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.66■□□□□ 0.26
Rfx2P48379 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.66■□□□□ 0.26
Rfx2P48379 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.66■□□□□ 0.26
Rfx2P48379 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rfx2P48379 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx2P48379 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx2P48379 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfx2P48379 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.65■□□□□ 0.26
Rfx2P48379 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Rfx2P48379 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.65■□□□□ 0.26
Rfx2P48379 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfx2P48379 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfx2P48379 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx2P48379 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfx2P48379 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rfx2P48379 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.64■□□□□ 0.25
Rfx2P48379 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx2P48379 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfx2P48379 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms