Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.62■□□□□ 0.73
Nkx1-2P42580 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx1-2P42580 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-2P42580 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Gm11355-201ENSMUST00000121120 306 ntBASIC19.61■□□□□ 0.73
Nkx1-2P42580 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-2P42580 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.6■□□□□ 0.73
Nkx1-2P42580 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.6■□□□□ 0.73
Nkx1-2P42580 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Gm18101-201ENSMUST00000215769 548 ntBASIC19.6■□□□□ 0.73
Nkx1-2P42580 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Gm9987-201ENSMUST00000069768 567 ntBASIC19.6■□□□□ 0.73
Nkx1-2P42580 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkx1-2P42580 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-2P42580 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.59■□□□□ 0.73
Nkx1-2P42580 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-2P42580 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.58■□□□□ 0.73
Nkx1-2P42580 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-2P42580 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms