Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd9P40240 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd9P40240 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cd9P40240 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd9P40240 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd9P40240 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd9P40240 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd9P40240 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.69■□□□□ 0.1
Cd9P40240 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.69■□□□□ 0.1
Cd9P40240 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cd9P40240 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.69■□□□□ 0.1
Cd9P40240 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.69■□□□□ 0.1
Cd9P40240 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cd9P40240 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm8825-201ENSMUST00000182565 998 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm4518-201ENSMUST00000182638 718 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.69■□□□□ 0.1
Cd9P40240 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Cd9P40240 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd9P40240 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd9P40240 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd9P40240 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Cd9P40240 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cd9P40240 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd9P40240 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd9P40240 Gm7977-201ENSMUST00000193787 748 ntBASIC15.68■□□□□ 0.1
Cd9P40240 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.68■□□□□ 0.1
Cd9P40240 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.68■□□□□ 0.1
Cd9P40240 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.68■□□□□ 0.1
Cd9P40240 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 App-207ENSMUST00000227737 2827 ntBASIC15.68■□□□□ 0.1
Cd9P40240 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd9P40240 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd9P40240 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.67■□□□□ 0.1
Cd9P40240 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd9P40240 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cd9P40240 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd9P40240 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.67■□□□□ 0.1
Cd9P40240 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Cd9P40240 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.67■□□□□ 0.1
Cd9P40240 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd9P40240 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd9P40240 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms