Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cxcl12P40224 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cxcl12P40224 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cxcl12P40224 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cxcl12P40224 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cxcl12P40224 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cxcl12P40224 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.37■□□□□ 0.21
Cxcl12P40224 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cxcl12P40224 Gm27437-201ENSMUST00000183429 107 ntBASIC16.37■□□□□ 0.21
Cxcl12P40224 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.37■□□□□ 0.21
Cxcl12P40224 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.37■□□□□ 0.21
Cxcl12P40224 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.37■□□□□ 0.21
Cxcl12P40224 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl12P40224 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cxcl12P40224 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.36■□□□□ 0.21
Cxcl12P40224 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.36■□□□□ 0.21
Cxcl12P40224 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.36■□□□□ 0.21
Cxcl12P40224 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.36■□□□□ 0.21
Cxcl12P40224 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.36■□□□□ 0.21
Cxcl12P40224 Gm5866-201ENSMUST00000177881 973 ntBASIC16.36■□□□□ 0.21
Cxcl12P40224 Gm10253-201ENSMUST00000194270 940 ntBASIC16.36■□□□□ 0.21
Cxcl12P40224 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cxcl12P40224 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cxcl12P40224 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cxcl12P40224 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Cxcl12P40224 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl12P40224 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.36■□□□□ 0.21
Cxcl12P40224 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Cxcl12P40224 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Cxcl12P40224 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.35■□□□□ 0.21
Cxcl12P40224 Gm24158-201ENSMUST00000175263 71 ntBASIC16.35■□□□□ 0.21
Cxcl12P40224 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.35■□□□□ 0.21
Cxcl12P40224 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Cxcl12P40224 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cxcl12P40224 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl12P40224 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cxcl12P40224 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.34■□□□□ 0.21
Cxcl12P40224 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms