Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col18a1P39061 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col18a1P39061 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Col18a1P39061 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Col18a1P39061 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col18a1P39061 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col18a1P39061 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col18a1P39061 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Col18a1P39061 Wnt10b-206ENSMUST00000228546 2709 ntBASIC21.07■□□□□ 0.96
Col18a1P39061 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.07■□□□□ 0.96
Col18a1P39061 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col18a1P39061 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col18a1P39061 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col18a1P39061 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col18a1P39061 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
Col18a1P39061 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col18a1P39061 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC21.07■□□□□ 0.96
Col18a1P39061 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC21.07■□□□□ 0.96
Col18a1P39061 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col18a1P39061 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col18a1P39061 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col18a1P39061 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col18a1P39061 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Col18a1P39061 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col18a1P39061 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.07■□□□□ 0.96
Col18a1P39061 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col18a1P39061 Gm15321-201ENSMUST00000121290 288 ntBASIC21.06■□□□□ 0.96
Col18a1P39061 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col18a1P39061 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col18a1P39061 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col18a1P39061 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Col18a1P39061 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col18a1P39061 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col18a1P39061 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Col18a1P39061 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col18a1P39061 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col18a1P39061 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Col18a1P39061 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 Gm8410-201ENSMUST00000117225 605 ntBASIC21.05■□□□□ 0.96
Col18a1P39061 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC21.05■□□□□ 0.96
Col18a1P39061 AL593843.1-201ENSMUST00000195891 145 ntBASIC21.05■□□□□ 0.96
Col18a1P39061 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col18a1P39061 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col18a1P39061 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col18a1P39061 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col18a1P39061 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC21.05■□□□□ 0.96
Col18a1P39061 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC21.04■□□□□ 0.96
Col18a1P39061 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC21.04■□□□□ 0.96
Col18a1P39061 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC21.04■□□□□ 0.96
Col18a1P39061 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col18a1P39061 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Col18a1P39061 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Col18a1P39061 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col18a1P39061 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC21.03■□□□□ 0.96
Col18a1P39061 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Col18a1P39061 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC21.03■□□□□ 0.96
Col18a1P39061 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC21.03■□□□□ 0.96
Col18a1P39061 Gm27533-201ENSMUST00000183800 152 ntBASIC21.03■□□□□ 0.96
Col18a1P39061 Mir7085-201ENSMUST00000184353 66 ntBASIC21.03■□□□□ 0.96
Col18a1P39061 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Col18a1P39061 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col18a1P39061 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col18a1P39061 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col18a1P39061 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col18a1P39061 Grk6-207ENSMUST00000225925 2769 ntBASIC21.03■□□□□ 0.96
Col18a1P39061 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.03■□□□□ 0.96
Col18a1P39061 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col18a1P39061 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col18a1P39061 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col18a1P39061 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col18a1P39061 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col18a1P39061 Gm14928-201ENSMUST00000120198 477 ntBASIC21.02■□□□□ 0.96
Col18a1P39061 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col18a1P39061 Gm8116-201ENSMUST00000182917 1201 ntBASIC21.02■□□□□ 0.96
Col18a1P39061 Gm45059-201ENSMUST00000205558 1077 ntBASIC21.02■□□□□ 0.96
Col18a1P39061 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col18a1P39061 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC21.02■□□□□ 0.96
Col18a1P39061 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col18a1P39061 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col18a1P39061 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms