Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Slc6a1P31648 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Slc6a1P31648 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Slc6a1P31648 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.74□□□□□ -0.21
Slc6a1P31648 Mir7071-201ENSMUST00000184847 69 ntBASIC13.74□□□□□ -0.21
Slc6a1P31648 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.74□□□□□ -0.21
Slc6a1P31648 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.74□□□□□ -0.21
Slc6a1P31648 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Slc6a1P31648 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.74□□□□□ -0.21
Slc6a1P31648 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.74□□□□□ -0.21
Slc6a1P31648 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.74□□□□□ -0.21
Slc6a1P31648 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.74□□□□□ -0.21
Slc6a1P31648 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Slc6a1P31648 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Slc6a1P31648 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Gm12382-201ENSMUST00000122005 922 ntBASIC13.73□□□□□ -0.21
Slc6a1P31648 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Gm37055-201ENSMUST00000191866 133 ntBASIC13.73□□□□□ -0.21
Slc6a1P31648 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.73□□□□□ -0.21
Slc6a1P31648 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Slc6a1P31648 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Slc6a1P31648 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.73□□□□□ -0.21
Slc6a1P31648 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Slc6a1P31648 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Mtag2-201ENSMUST00000058665 714 ntBASIC13.72□□□□□ -0.21
Slc6a1P31648 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.72□□□□□ -0.21
Slc6a1P31648 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.72□□□□□ -0.21
Slc6a1P31648 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.72□□□□□ -0.21
Slc6a1P31648 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.72□□□□□ -0.21
Slc6a1P31648 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc6a1P31648 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.71□□□□□ -0.21
Slc6a1P31648 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.71□□□□□ -0.21
Slc6a1P31648 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms